HTCondorTaskScheduler (Eoulsan 2.6.1 API)

java.lang.Object
- fr.ens.biologie.genomique.eoulsan.core.schedulers.AbstractTaskScheduler
- - fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.AbstractClusterTaskScheduler
  - - fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.BpipeTaskScheduler
    - - fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.BundledScriptBpipeTaskScheduler
      - fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.HTCondorTaskScheduler

All Implemented Interfaces:

ClusterTaskScheduler, TaskScheduler
```
public class HTCondorTaskScheduler
extends BundledScriptBpipeTaskScheduler
```
This class define a HTCondor cluster scheduler using a Bpipe script.

Since:

2.0

Author:

Laurent Jourdren

Nested Class Summary
- Nested classes/interfaces inherited from class fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.AbstractClusterTaskScheduler
  AbstractClusterTaskScheduler.ProcessThreadOutput
- Nested classes/interfaces inherited from interface fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.ClusterTaskScheduler
  ClusterTaskScheduler.StatusResult, ClusterTaskScheduler.StatusValue

Field Summary

Fields
Modifier and Type Field Description

static String SCHEDULER_NAME

Constructor Summary

Constructors
Constructor Description

HTCondorTaskScheduler()
Constructor.

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`protected Map<String,String>`	`additionalScriptEnvironment()`	Define additional environment variable for bpipe scripts.

Methods inherited from class fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.BundledScriptBpipeTaskScheduler
getBpipeCommandWrapper, getSchedulerName

Methods inherited from class fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.BpipeTaskScheduler
cleanupJob, configure, statusJob, stopJob, submitJob

Methods inherited from class fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.AbstractClusterTaskScheduler
stop, submit

Methods inherited from class fr.ens.biologie.genomique.eoulsan.core.schedulers.AbstractTaskScheduler
afterExecuteTask, beforeExecuteTask, executeTask, getResult, getStatus, getStep, getStep, getTaskDoneCount, getTaskRunningCount, getTaskSubmittedCount, getTotalTaskDoneCount, getTotalTaskRunningCount, getTotalTaskSubmittedCount, isStarted, isStopped, start, submit, waitEndOfTasks

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface fr.ens.biologie.genomique.eoulsan.core.schedulers.TaskScheduler
getResult, getStatus, getTaskDoneCount, getTaskRunningCount, getTaskSubmittedCount, getTotalTaskDoneCount, getTotalTaskRunningCount, getTotalTaskSubmittedCount, start, submit, waitEndOfTasks

- Field Detail
  - SCHEDULER_NAME
```
public static final String SCHEDULER_NAME
```
    See Also:
    
    Constant Field Values
- Constructor Detail
  - HTCondorTaskScheduler
```
public HTCondorTaskScheduler()
```
    Constructor.
- Method Detail
  - additionalScriptEnvironment
```
protected Map<String,String> additionalScriptEnvironment()
```
    Description copied from class: BpipeTaskScheduler
    
    Define additional environment variable for bpipe scripts.
    
    Overrides:
    
    additionalScriptEnvironment in class BpipeTaskScheduler
    
    Returns:
    
    a Map with the additional environment variables