Package fr.ens.biologie.genomique.eoulsan.core

Interface StepConfigurationContext

All Known Subinterfaces:
TaskContext
All Known Implementing Classes:
StepConfigurationContextImpl, TaskContextImpl
public interface StepConfigurationContext

  • Method Details

    • getCommandName

      String getCommandName()
      Get the command name.
      Returns:
      the command name

    • getJobUUID

      String getJobUUID()
      Get the UUID of the job.
      Returns:
      the job UUID

    • getJobDescription

      String getJobDescription()
      Get the job description.
      Returns:
      the job description

    • getJobEnvironment

      String getJobEnvironment()
      Get the job environment.
      Returns:
      the job environment

    • getCommandDescription

      String getCommandDescription()
      Get command description.
      Returns:
      the command description

    • getCommandAuthor

      String getCommandAuthor()
      Get the command author.
      Returns:
      the command author

    • getOutputDirectory

      DataFile getOutputDirectory()
      Get the output path.
      Returns:
      Returns the output Path

    • getJobDirectory

      DataFile getJobDirectory()
      Get the job path.
      Returns:
      Returns the log Path

    • getStepOutputDirectory

      DataFile getStepOutputDirectory()
      Get the step working directory.
      Returns:
      Returns the step working directory

    • getJobId

      String getJobId()
      Get the job id.
      Returns:
      the job id

    • getJobHost

      String getJobHost()
      Get the host of the job.
      Returns:
      a string with the host of the job

    • getDesignFile

      DataFile getDesignFile()
      Get the design file path.
      Returns:
      the design file path

    • getWorkflowFile

      DataFile getWorkflowFile()
      Get the workflow file path.
      Returns:
      the workflow file path

    • getRuntime

      AbstractEoulsanRuntime getRuntime()
      Get EoulsanRuntime.
      Returns:
      the EoulsanRuntime

    • getSettings

      Settings getSettings()
      Get Eoulsan settings.
      Returns:
      the Settings

    • getLogger

      Logger getLogger()
      Get the logger.
      Returns:
      the logger

    • getGenericLogger

      fr.ens.biologie.genomique.kenetre.log.GenericLogger getGenericLogger()
      Get the generic logger.
      Returns:
      the generic logger

    • getCurrentStep

      Step getCurrentStep()
      Get the current step.
      Returns:
      the current Step or null if no Step is currently running.

    • getLocalTempDirectory

      File getLocalTempDirectory()
      Get local temporary directory.
      Returns:
      the local temporary directory