Package fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters

Class BundledScriptBpipeTaskScheduler

java.lang.Object

fr.ens.biologie.genomique.eoulsan.core.schedulers.AbstractTaskScheduler

fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.AbstractClusterTaskScheduler

fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.BpipeTaskScheduler

fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.BundledScriptBpipeTaskScheduler

All Implemented Interfaces:

ClusterTaskScheduler, TaskScheduler

Direct Known Subclasses:

HTCondorTaskScheduler, PBSProTaskScheduler, SLURMTaskScheduler, TORQUETaskScheduler

public abstract class BundledScriptBpipeTaskScheduler
extends BpipeTaskScheduler

This class define an abstract scheduler that use a bpipe script bundled in Eoulsan distribution.

Since:

2.0

Author:

Laurent Jourdren

Nested Class Summary

Nested classes/interfaces inherited from class fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.AbstractClusterTaskScheduler

AbstractClusterTaskScheduler.ProcessThreadOutput

Nested classes/interfaces inherited from interface fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.ClusterTaskScheduler

ClusterTaskScheduler.StatusResult, ClusterTaskScheduler.StatusValue

Method Summary

Modifier and Type	Method	Description
String	getSchedulerName()	Get the scheduler name.

Methods inherited from class fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.BpipeTaskScheduler

cleanupJob, configure, statusJob, stopJob, submitJob

Methods inherited from class fr.ens.biologie.genomique.eoulsan.core.schedulers.clusters.AbstractClusterTaskScheduler

stop, submit

Methods inherited from class fr.ens.biologie.genomique.eoulsan.core.schedulers.AbstractTaskScheduler

getResult, getStatus, getTaskDoneCount, getTaskRunningCount, getTaskSubmittedCount, getTotalTaskDoneCount, getTotalTaskRunningCount, getTotalTaskSubmittedCount, start, submit, waitEndOfTasks

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface fr.ens.biologie.genomique.eoulsan.core.schedulers.TaskScheduler

getResult, getStatus, getTaskDoneCount, getTaskRunningCount, getTaskSubmittedCount, getTotalTaskDoneCount, getTotalTaskRunningCount, getTotalTaskSubmittedCount, start, submit, waitEndOfTasks

Method Details

getSchedulerName

public String getSchedulerName()

Description copied from interface: ClusterTaskScheduler

Get the scheduler name.

Returns:

the name of the scheduler