Package fr.ens.biologie.genomique.eoulsan.data.storages

Class DataFileGenomeDescStorage

java.lang.Object
fr.ens.biologie.genomique.kenetre.storage.AbstractFileGenomeDescStorage
fr.ens.biologie.genomique.eoulsan.data.storages.DataFileGenomeDescStorage
All Implemented Interfaces:
fr.ens.biologie.genomique.kenetre.storage.GenomeDescStorage
public class DataFileGenomeDescStorage extends fr.ens.biologie.genomique.kenetre.storage.AbstractFileGenomeDescStorage
This class define a storage for genome description files using DataFile API.
Since:
2.6
Author:
Laurent Jourdren

  • Method Summary

    Modifier and Type
    Method
    Description
    static fr.ens.biologie.genomique.kenetre.storage.GenomeDescStorage
    getInstance(DataFile dir, fr.ens.biologie.genomique.kenetre.log.GenericLogger logger)
    Create a GenomeDescStorage

    Methods inherited from class fr.ens.biologie.genomique.kenetre.storage.AbstractFileGenomeDescStorage

    get, put

    Methods inherited from class java.lang.Object

    equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

  • Method Details

    • getInstance

      public static fr.ens.biologie.genomique.kenetre.storage.GenomeDescStorage getInstance(DataFile dir, fr.ens.biologie.genomique.kenetre.log.GenericLogger logger)
      Create a GenomeDescStorage
      Parameters:
      dir - the path of the genome descriptions storage
      logger - to use
      Returns:
      a GenomeDescStorage object if the path contains an index storage or null if no index storage is found