Uses of Class
fr.ens.biologie.genomique.eoulsan.galaxytools.ToolExecutorResult

Packages that use ToolExecutorResult

Package	Description
fr.ens.biologie.genomique.eoulsan.galaxytools	This package contain classes related to read tool xml file from galaxy.
fr.ens.biologie.genomique.eoulsan.galaxytools.executorinterpreters	This package contain classes related to the Galaxy tool executor interpreters.

Uses of ToolExecutorResult in fr.ens.biologie.genomique.eoulsan.galaxytools

Methods in fr.ens.biologie.genomique.eoulsan.galaxytools that return ToolExecutorResult

Modifier and Type	Method	Description
ToolExecutorResult	GalaxyToolInterpreter.execute(TaskContext context)	Convert command tag from tool file in string, variable are replace by value.

Uses of ToolExecutorResult in fr.ens.biologie.genomique.eoulsan.galaxytools.executorinterpreters

Methods in fr.ens.biologie.genomique.eoulsan.galaxytools.executorinterpreters that return ToolExecutorResult

Modifier and Type	Method	Description
ToolExecutorResult	AbstractExecutorInterpreter.execute(List<String> commandLine, File executionDirectory, File temporaryDirectory, File stdoutFile, File stderrFile, File... filesUsed)
ToolExecutorResult	ExecutorInterpreter.execute(List<String> commandLine, File executionDirectory, File temporaryDirectory, File stdoutFile, File stderrFile, File... filesUsed)	Execute a command line.