Package fr.ens.biologie.genomique.aozan

Root package of Aozan. It contains classes for exception, settings, runtime and the main class.

Since:

0.1

Class Summary

Class	Description
Aozan2Logger
Common	This class contains common methods like logger initialization.
Globals	This class contains Globals constants.
QC	This class is the main QC class.
QCReport	This class generate the QC Report.
QCReportExporter	This class export the QC Report in several formats.
RunData	This class define a RunData object that contains all information generated by collectors.
RunData.PooledSampleComparator	This class define a comparator to order pooled samples.
RunData.ProjectComparator	This class define a comparator to order projects.
RunDataGenerator	This Class collect Data.
Settings	This class define constants to keys of configuration Aozan file.
Storages	This class define storage for FastQ Screen.

Exception Summary

Exception	Description
AozanException	A nestable Aozan exception.
AozanRuntimeException	A nestable Aozan runtime exception.