Uses of Package
fr.ens.biologie.genomique.aozan
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Packages that use fr.ens.biologie.genomique.aozan Package Description fr.ens.biologie.genomique.aozan Root package of Aozan.fr.ens.biologie.genomique.aozan.aozan3.dataprocessor fr.ens.biologie.genomique.aozan.aozan3.legacy fr.ens.biologie.genomique.aozan.collectors This package defines the collectors which collects data for a run.fr.ens.biologie.genomique.aozan.collectors.interop This package defines the collectors which collects data from InterOp binary files for a run.fr.ens.biologie.genomique.aozan.collectors.stats This package defines the statistics collectors which collects data for a run.fr.ens.biologie.genomique.aozan.demux This package allows to re-demultiplexing selected project sequencing.fr.ens.biologie.genomique.aozan.fastqc This package contains a QCModule for FastQC that list the bad tiles in a fastq file and class used for modify fastqc bytecode, it is necessary with FastQC version 0.10.1.fr.ens.biologie.genomique.aozan.fastqscreen This package contains a module fastqscreen for the contamination detection in each sample of a run.fr.ens.biologie.genomique.aozan.io This package contains general I/O classes for Aozan.fr.ens.biologie.genomique.aozan.tests This package contains class of tests which defines the collector to launch and creates a report of a quality control.fr.ens.biologie.genomique.aozan.tests.global This package contains class of global tests which defines the collector to launch and creates a report of a quality control.fr.ens.biologie.genomique.aozan.tests.lane This package contains class of lane tests which defines the collector to launch and creates a report of a quality control.fr.ens.biologie.genomique.aozan.tests.pooledsample This package contains class of project tests which defines the collector to launch and creates a report of a quality control.fr.ens.biologie.genomique.aozan.tests.project This package contains class of project tests which defines the collector to launch and creates a report of a quality control.fr.ens.biologie.genomique.aozan.tests.sample This package contains class of sample tests which defines the collector to launch and creates a report of a quality control.fr.ens.biologie.genomique.aozan.util This package utility classes. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan Class Description AozanException A nestable Aozan exception.QC This class is the main QC class.QCReport This class generate the QC Report.RunData This class define a RunData object that contains all information generated by collectors.Settings This class define constants to keys of configuration Aozan file.Storages This class define storage for FastQ Screen. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.aozan3.dataprocessor Class Description Settings This class define constants to keys of configuration Aozan file. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.aozan3.legacy Class Description AozanException A nestable Aozan exception. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.collectors Class Description AozanException A nestable Aozan exception.QC This class is the main QC class.RunData This class define a RunData object that contains all information generated by collectors. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.collectors.interop Class Description AozanException A nestable Aozan exception.RunData This class define a RunData object that contains all information generated by collectors. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.collectors.stats Class Description AozanException A nestable Aozan exception.RunData This class define a RunData object that contains all information generated by collectors. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.demux Class Description AozanException A nestable Aozan exception. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.fastqc Class Description AozanException A nestable Aozan exception. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.fastqscreen Class Description AozanException A nestable Aozan exception.RunData This class define a RunData object that contains all information generated by collectors.Settings This class define constants to keys of configuration Aozan file. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.io Class Description QC This class is the main QC class.RunData This class define a RunData object that contains all information generated by collectors. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.tests Class Description AozanException A nestable Aozan exception.Settings This class define constants to keys of configuration Aozan file. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.tests.global Class Description AozanException A nestable Aozan exception.RunData This class define a RunData object that contains all information generated by collectors. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.tests.lane Class Description AozanException A nestable Aozan exception.RunData This class define a RunData object that contains all information generated by collectors. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.tests.pooledsample Class Description AozanException A nestable Aozan exception.RunData This class define a RunData object that contains all information generated by collectors. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.tests.project Class Description AozanException A nestable Aozan exception.RunData This class define a RunData object that contains all information generated by collectors. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.tests.sample Class Description AozanException A nestable Aozan exception.RunData This class define a RunData object that contains all information generated by collectors. -
Classes in fr.ens.biologie.genomique.aozan used by fr.ens.biologie.genomique.aozan.util Class Description AozanException A nestable Aozan exception.RunData This class define a RunData object that contains all information generated by collectors.