Uses of Class
fr.ens.biologie.genomique.eoulsan.core.workflow.AbstractWorkflow
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Packages that use AbstractWorkflow Package Description fr.ens.biologie.genomique.eoulsan.core.workflow This package contains Eoulsan workflow dedicated classes. -
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Uses of AbstractWorkflow in fr.ens.biologie.genomique.eoulsan.core.workflow
Subclasses of AbstractWorkflow in fr.ens.biologie.genomique.eoulsan.core.workflow Modifier and Type Class Description class
CommandWorkflow
This class define a workflow based on a Command object (workflow file).Constructors in fr.ens.biologie.genomique.eoulsan.core.workflow with parameters of type AbstractWorkflow Constructor Description CommandStep(AbstractWorkflow workflow, Module module)
Create a step for a standard step from an existing step object.CommandStep(AbstractWorkflow workflow, Module module, Set<Parameter> parameters)
Create a step for a standard step from an existing step object.CommandStep(AbstractWorkflow workflow, Step.StepType type)
Constructor that create a step with nothing to execute like ROOT_STEP, DESIGN_STEP and FIRST_STEP.CommandStep(AbstractWorkflow workflow, DataFormat format)
Create a Generator Workflow step.CommandStep(AbstractWorkflow workflow, String id, String moduleName, String stepVersion, Set<Parameter> parameters, boolean skip, Step.DiscardOutput discardOutput, int requiredMemory, int requiredProcessors, String dataProduct)
Create a step for a standard step.CommandStep(AbstractWorkflow workflow, String id, String moduleName, String stepVersion, Set<Parameter> parameters, boolean skip, Step.DiscardOutput discardOutput, int requiredMemory, int requiredProcessors, String dataProduct, DataFile outputDirectory)
Create a step for a standard step.Workflow2Graphviz(AbstractWorkflow workflow, DataFile dotFile, DataFile imageFile)
Public constructor.
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