Uses of Class
fr.ens.biologie.genomique.eoulsan.modules.mapping.AbstractSAMFilterModule
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Packages that use AbstractSAMFilterModule Package Description fr.ens.biologie.genomique.eoulsan.modules.mapping.hadoop This package contain all the classes related to the mapping (reads filtering, mapping and alignments filtering) step in hadoop mode.fr.ens.biologie.genomique.eoulsan.modules.mapping.local This package contain all the classes related to the mapping (reads filtering, mapping and alignments filtering) step in local mode. -
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Uses of AbstractSAMFilterModule in fr.ens.biologie.genomique.eoulsan.modules.mapping.hadoop
Subclasses of AbstractSAMFilterModule in fr.ens.biologie.genomique.eoulsan.modules.mapping.hadoop Modifier and Type Class Description class
SAMFilterHadoopModule
This class define a filter alignment step in Hadoop mode. -
Uses of AbstractSAMFilterModule in fr.ens.biologie.genomique.eoulsan.modules.mapping.local
Subclasses of AbstractSAMFilterModule in fr.ens.biologie.genomique.eoulsan.modules.mapping.local Modifier and Type Class Description class
SAMFilterLocalModule
This class define a Step for alignments filtering.
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