Package fr.ens.biologie.genomique.eoulsan.design

Interface Experiment

    • Method Detail

      • getDesign

        Design getDesign()
        Get the design related to the experiment.
        Returns:
        the Design object related to the experiment

      • getId

        String getId()
        get the experiment id.
        Returns:
        the experiment id

      • getName

        String getName()
        Get the experiment name.
        Returns:
        the experiment name

      • getNumber

        int getNumber()
        Get the experiment number.
        Returns:
        the experiment number

      • getMetadata

        ExperimentMetadata getMetadata()
        Get the experiment metadata.
        Returns:
        the experiment metadata

      • getSamples

        List<Sample> getSamples()
        Get the samples of the experiment.
        Returns:
        a list of ExperimentSample object

      • getExperimentSamples

        List<ExperimentSample> getExperimentSamples()
        Get experiment samples list.
        Returns:
        a list of ExperimentSample object

      • getExperimentSample

        ExperimentSample getExperimentSample​(Sample sample)
        Get the experiment sample related to the sample.
        Parameters:
        sample - the sample
        Returns:
        an experiment sample object if exists or null

      • setName

        void setName​(String newExperimentName)
        Set the name of the experiment.
        Parameters:
        newExperimentName - the new experiment name

      • addSample

        ExperimentSample addSample​(Sample sample)
        Add a sample.
        Parameters:
        sample - the sample to add
        Returns:
        an experiment sample object

      • removeSample

        void removeSample​(Sample sample)
        Remove the sample.
        Parameters:
        sample - the sample to remove

      • containsSample

        boolean containsSample​(Sample sample)
        Test if the experiment contains a sample.
        Parameters:
        sample - the sample to test
        Returns:
        true if the sample is the experiment