Package fr.ens.biologie.genomique.eoulsan.design.io

Class DefaultDesignReader

java.lang.Object

fr.ens.biologie.genomique.eoulsan.design.io.DefaultDesignReader

All Implemented Interfaces:

DesignReader

public class DefaultDesignReader
extends Object
implements DesignReader

This class allow to read a design file whatever the underlying design format.

Since:

2.0

Author:

Laurent Jourdren

Constructor Summary

Constructors

Constructor	Description
DefaultDesignReader(DataFile file)	Public constructor.
DefaultDesignReader(File file)	Public constructor.
DefaultDesignReader(InputStream is)	Public constructor
DefaultDesignReader(String filename)	Public constructor
DefaultDesignReader(Path file)	Public constructor.

Method Summary

Modifier and Type	Method	Description
Design	read()	Read the design.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

DefaultDesignReader

public DefaultDesignReader(Path file)
                    throws IOException

Public constructor.

Parameters:

file - file to read

Throws:

FileNotFoundException - if the file cannot be found

IOException

DefaultDesignReader

public DefaultDesignReader(File file)
                    throws IOException

Public constructor.

Parameters:

file - file to read

Throws:

IOException - if the file cannot be found

DefaultDesignReader

public DefaultDesignReader(DataFile file)
                    throws IOException

Public constructor.

Parameters:

file - file to read

Throws:

IOException - if an error occurs while opening the file

DefaultDesignReader

public DefaultDesignReader(InputStream is)
                    throws IOException

Public constructor

Parameters:

is - Input stream to read

Throws:

IOException - if an error occurs while reading the file

DefaultDesignReader

public DefaultDesignReader(String filename)
                    throws IOException

Public constructor

Parameters:

filename - File to read

Throws:

IOException - if the file doesn't exist

Method Details

read

public Design read()
            throws IOException

Description copied from interface: DesignReader

Read the design.

Specified by:

read in interface DesignReader

Returns:

a new Design object

Throws:

IOException - if an error occurs while reading the design