Package fr.ens.biologie.genomique.eoulsan.modules.chipseq

Class ChIPSeqDataFormats

java.lang.Object

fr.ens.biologie.genomique.eoulsan.modules.chipseq.ChIPSeqDataFormats

public class ChIPSeqDataFormats
extends Object

This class contains the definition of some DataFormats for ChiP-Seq.

Since:

2.3

Author:

Laurent Jourdren

Field Summary

Fields

Modifier and Type	Field	Description
static final DataFormat	GAPPED_PEAK	Gapped peak format.
static final DataFormat	MACS2_RMODEL	MACS 2 R model format.
static final DataFormat	PEAK	Peak format data format.
static final DataFormat	PEAK_XLS	Peaks XLS format.

Method Summary

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

PEAK

public static final DataFormat PEAK

Peak format data format.

MACS2_RMODEL

public static final DataFormat MACS2_RMODEL

MACS 2 R model format.

GAPPED_PEAK

public static final DataFormat GAPPED_PEAK

Gapped peak format.

PEAK_XLS

public static final DataFormat PEAK_XLS

Peaks XLS format.