Enum DESeq2.SizeFactorsType
- java.lang.Object
-
- java.lang.Enum<DESeq2.SizeFactorsType>
-
- fr.ens.biologie.genomique.eoulsan.modules.diffana.DESeq2.SizeFactorsType
-
- All Implemented Interfaces:
Serializable
,Comparable<DESeq2.SizeFactorsType>
- Enclosing class:
- DESeq2
public static enum DESeq2.SizeFactorsType extends Enum<DESeq2.SizeFactorsType>
Enum for the sizeFactorsType option in DESeq2 related to the estimation of the size factor.
-
-
Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description static DESeq2.SizeFactorsType
get(Parameter parameter)
Get the size factors type to be used in DESeq2.String
toDESeq2Value()
Convert the enum name into DESeq2 value.static DESeq2.SizeFactorsType
valueOf(String name)
Returns the enum constant of this type with the specified name.static DESeq2.SizeFactorsType[]
values()
Returns an array containing the constants of this enum type, in the order they are declared.
-
-
-
Enum Constant Detail
-
RATIO
public static final DESeq2.SizeFactorsType RATIO
-
ITERATE
public static final DESeq2.SizeFactorsType ITERATE
-
-
Method Detail
-
values
public static DESeq2.SizeFactorsType[] values()
Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:for (DESeq2.SizeFactorsType c : DESeq2.SizeFactorsType.values()) System.out.println(c);
- Returns:
- an array containing the constants of this enum type, in the order they are declared
-
valueOf
public static DESeq2.SizeFactorsType valueOf(String name)
Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)- Parameters:
name
- the name of the enum constant to be returned.- Returns:
- the enum constant with the specified name
- Throws:
IllegalArgumentException
- if this enum type has no constant with the specified nameNullPointerException
- if the argument is null
-
get
public static DESeq2.SizeFactorsType get(Parameter parameter) throws EoulsanException
Get the size factors type to be used in DESeq2.- Parameters:
parameter
- Eoulsan parameter- Returns:
- the size factors type value
- Throws:
EoulsanException
- if the size factors type value is different from ratio or iterate
-
toDESeq2Value
public String toDESeq2Value()
Convert the enum name into DESeq2 value.- Returns:
- DESeq2 value
-
-