Package fr.ens.biologie.genomique.eoulsan.modules.diffana

Enum Class DiffAna.DispersionMethod

java.lang.Object

java.lang.Enum<DiffAna.DispersionMethod>

fr.ens.biologie.genomique.eoulsan.modules.diffana.DiffAna.DispersionMethod

All Implemented Interfaces:

Serializable, Comparable<DiffAna.DispersionMethod>, Constable

Enclosing class:

DiffAna

public static enum DiffAna.DispersionMethod
extends Enum<DiffAna.DispersionMethod>

Dispersion estimation method enum for DESeq differential analysis

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Enum

Enum.EnumDesc<E extends Enum<E>>

Enum Constant Summary

Enum Constants

Enum Constant	Description
BLIND
PER_CONDITION
POOLED

Method Summary

Modifier and Type	Method	Description
static DiffAna.DispersionMethod	getDispEstMethodFromName(String name)	Get the Dispersion estimation method form its name
String	getName()	Get the dispersion estimation method
static DiffAna.DispersionMethod	valueOf(String name)	Returns the enum constant of this class with the specified name.
static DiffAna.DispersionMethod[]	values()	Returns an array containing the constants of this enum class, in the order they are declared.

Methods inherited from class java.lang.Enum

compareTo, describeConstable, equals, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Details

POOLED

public static final DiffAna.DispersionMethod POOLED

PER_CONDITION

public static final DiffAna.DispersionMethod PER_CONDITION

BLIND

public static final DiffAna.DispersionMethod BLIND

Method Details

values

public static DiffAna.DispersionMethod[] values()

Returns an array containing the constants of this enum class, in the order they are declared.

Returns:

an array containing the constants of this enum class, in the order they are declared

valueOf

public static DiffAna.DispersionMethod valueOf(String name)

Returns the enum constant of this class with the specified name. The string must match exactly an identifier used to declare an enum constant in this class. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum class has no constant with the specified name

NullPointerException - if the argument is null

getName

public String getName()

Get the dispersion estimation method

Returns:

a string with the dispersion estimation method

getDispEstMethodFromName

public static DiffAna.DispersionMethod getDispEstMethodFromName(String name)

Get the Dispersion estimation method form its name

Parameters:

name - dispersion estimation method name

Returns:

a DispersionMethod or null if no DispersionMethod found for the name