Example data
We provide in this section all the required files to test Aozan. These raw data files have been produced during a mouse RNASeq experiment. The run was perform on an Illumina NextSeq 500 sequencer in paired-end 75 bases mode.
Create a demo configuration
To simply the launch of an Aozan demo, we now provide a shell script, that allow to create all directories required by Aozan and a valid configuration file. This script can also download all the files required by the demo (raw data and reference data).
You can perform a full Aozan demo computation using the following command lines:
- Download the script.
$ wget http://outils.genomique.biologie.ens.fr/aozan/data/configure-aozan-demo.sh
- Set the execute attribute on script
$ chmod +x configure-aozan-demo.sh
- Launch the script and the download of the required files
$ ./configure-aozan-demo.sh
- Launch Aozan
$ ./aozan-demo/aozan-2.2.1/aozan.sh ./aozan-demo/conf/aozan.conf