Package fr.ens.biologie.genomique.eoulsan.modules.chipseq.qc

package fr.ens.biologie.genomique.eoulsan.modules.chipseq.qc

This packages contains all the quality check modules for ChIP-Seq.

Since:

2.0

Author:

Celine Hernandez - CSB lab - ENS - Paris

Related Packages

Package	Description
fr.ens.biologie.genomique.eoulsan.modules.chipseq	This packages contains the ChIP-Seq modules.
fr.ens.biologie.genomique.eoulsan.modules.chipseq.peakcalling	This packages contains the peak-calling modules.

Classes

Class	Description
CountSplicedReadsModule	This step computes how many spliced alignments there are in a SAM file.
IDRModule	This class defines the IDR quality check step.