Uses of Class
fr.ens.biologie.genomique.eoulsan.modules.mapping.AbstractSAM2BAMModule

Packages that use AbstractSAM2BAMModule

Package	Description
fr.ens.biologie.genomique.eoulsan.modules.mapping.hadoop	This package contain all the classes related to the mapping (reads filtering, mapping and alignments filtering) step in hadoop mode.
fr.ens.biologie.genomique.eoulsan.modules.mapping.local	This package contain all the classes related to the mapping (reads filtering, mapping and alignments filtering) step in local mode.

Uses of AbstractSAM2BAMModule in fr.ens.biologie.genomique.eoulsan.modules.mapping.hadoop

Subclasses of AbstractSAM2BAMModule in fr.ens.biologie.genomique.eoulsan.modules.mapping.hadoop

Modifier and Type	Class	Description
class	SAM2BAMHadoopModule	This class define a module for converting SAM files into BAM.

Uses of AbstractSAM2BAMModule in fr.ens.biologie.genomique.eoulsan.modules.mapping.local

Subclasses of AbstractSAM2BAMModule in fr.ens.biologie.genomique.eoulsan.modules.mapping.local

Modifier and Type	Class	Description
class	SAM2BAMLocalModule	This class define a module for converting SAM files into BAM.