Package fr.ens.biologie.genomique.eoulsan.modules.mapping
package fr.ens.biologie.genomique.eoulsan.modules.mapping
This package contain all the classes related to the mapping (reads filtering, mapping and
alignments filtering) step.
- Since:
- 1.0
-
ClassDescriptionThis class define a module for converting BAM files into SAM.This class define an abstract module for read filtering, mapping and alignments filtering.This class define an abstract module for read filtering.This class define an abstract module for read mapping.This class define a module for converting SAM files into BAM.This class define a module for converting SAM files into BAM.This class define an abstract module for alignments filtering.This class define a module for converting SAM files into BED.This enum define the names of the counters of the steps of this package.