Package fr.ens.biologie.genomique.eoulsan.modules.mapping.local
package fr.ens.biologie.genomique.eoulsan.modules.mapping.local
This package contain all the classes related to the mapping (reads filtering, mapping and
alignments filtering) step in local mode.
- Since:
- 1.0
-
ClassesClassDescriptionThis class define a module for converting BAM files into SAM.This class define a module for reads filtering.This class define a module for reads mapping.This class define a module for converting SAM files into BAM.This class define a module for converting SAM files into FASTQ.This class define a Step for alignments filtering.This class define a module for converting SAM files into BED.This class define a module for reads splitting.